STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCF41213.1acyl-CoA thioester hydrolase. (148 aa)    
Predicted Functional Partners:
SCF05792.1
Acyl transferase domain-containing protein.
  
 0.988
SCE77022.1
Acyl transferase domain-containing protein.
  
 0.986
SCF35280.1
Acyl transferase domain-containing protein.
  
 0.986
SCF50106.1
Erythronolide synthase docking.
  
 0.986
SCF26233.1
Amino acid adenylation domain-containing protein.
  
 0.985
SCE77066.1
8-amino-7-oxononanoate synthase.
  
 0.980
SCF49682.1
Acyl transferase domain-containing protein.
  
 0.980
SCE77518.1
Acyl transferase domain-containing protein.
  
 0.977
SCF02618.1
6-methylsalicylic acid synthase.
  
 0.977
SCF48970.1
Pimaricinolide synthase PimS1.
  
 0.977
Your Current Organism:
Micromonospora matsumotoense
NCBI taxonomy Id: 121616
Other names: ATCC 49364, CIP 106812, Catellatispora matsumotoense, Catellatispora matsumotoensis, Catellatospora matsumotoense, Catellatospora matsumotoensis, DSM 44100, IFO 14550, IMSNU 22003, JCM 9104, M. matsumotoense, Micromonospora matsumotoensis, NBRC 14550, NRRL B-16490, VKM Ac-2009, strain 6393-C
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