STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCF07440.1ATP-grasp domain-containing protein. (429 aa)    
Predicted Functional Partners:
accA
acetyl-CoA carboxylase carboxyltransferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
  
 0.995
SCF39424.1
acetyl-CoA carboxylase biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 0.995
SCF46428.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
  
 0.977
SCF13213.1
Amino acid adenylation domain-containing protein.
  
 
 0.901
SCF48066.1
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
   
   0.898
SCF07393.1
Methyltransferase domain-containing protein; Belongs to the N(4)/N(6)-methyltransferase family.
 
     0.895
SCF04033.1
Acyl carrier protein.
  
 
 0.893
SCF26233.1
Amino acid adenylation domain-containing protein.
  
 
 0.872
SCF05792.1
Acyl transferase domain-containing protein.
  
 
 0.870
SCF07408.1
Major Facilitator Superfamily protein.
 
     0.858
Your Current Organism:
Micromonospora matsumotoense
NCBI taxonomy Id: 121616
Other names: ATCC 49364, CIP 106812, Catellatispora matsumotoense, Catellatispora matsumotoensis, Catellatospora matsumotoense, Catellatospora matsumotoensis, DSM 44100, IFO 14550, IMSNU 22003, JCM 9104, M. matsumotoense, Micromonospora matsumotoensis, NBRC 14550, NRRL B-16490, VKM Ac-2009, strain 6393-C
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