STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN341_5610Putative outer membrane protein. (229 aa)    
Predicted Functional Partners:
BN341_5600
ABC-type transport system involved in resistance to organic solvents, permease component.
       0.692
BN341_5590
Methionine ABC transporter ATP-binding protein.
       0.689
BN341_5580
ABC transporter, periplasmic substrate-binding protein, putative.
       0.686
BN341_5570
Hypothetical protein.
       0.664
BN341_5560
Hypothetical protein.
       0.547
Your Current Organism:
Helicobacter heilmannii
NCBI taxonomy Id: 1216962
Other names: H. heilmannii ASB1.4, Helicobacter heilmannii ASB1.4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.