STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001570965_02083Unannotated protein. (201 aa)    
Predicted Functional Partners:
GCA_001570965_02084
Unannotated protein.
       0.634
GCA_001570965_02085
Unannotated protein.
       0.634
GCA_001570965_02086
Unannotated protein.
       0.634
GCA_001570965_02087
Unannotated protein.
       0.631
GCA_001570965_00525
Unannotated protein.
  
     0.521
GCA_001570965_00449
Unannotated protein.
  
     0.510
GCA_001570965_01910
Unannotated protein.
  
     0.509
GCA_001570965_00087
Unannotated protein.
  
     0.492
GCA_001570965_01725
Unannotated protein.
  
     0.492
GCA_001570965_01724
Unannotated protein.
  
     0.485
Your Current Organism:
Janibacter corallicola
NCBI taxonomy Id: 1216969
Other names: J. corallicola NBRC 107790, Janibacter corallicola NBRC 107790
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.