STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EXU32_16685Unannotated protein; Belongs to the LysR transcriptional regulatory family. (353 aa)    
Predicted Functional Partners:
EXU32_16690
Unannotated protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
 
 
 
 0.825
GCA_001570985_02375
Unannotated protein.
  
     0.684
EXU32_14320
Unannotated protein; Belongs to the LysR transcriptional regulatory family.
  
     0.615
EXU32_08200
Unannotated protein; Belongs to the LysR transcriptional regulatory family.
  
     0.597
gltB
Unannotated protein.
  
  
 0.547
GCA_001570985_03296
Unannotated protein.
 
 
 0.452
EXU32_16725
Unannotated protein.
  
     0.436
Your Current Organism:
Janibacter limosus
NCBI taxonomy Id: 1216970
Other names: J. limosus NBRC 16128, Janibacter limosus NBRC 16128
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.