Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ALV26789.1 | ALV26844.1 | APZ00_06575 | APZ00_06905 | DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.591 |
| ALV26789.1 | ALV27016.1 | APZ00_06575 | APZ00_07975 | DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. | Heme biosynthesis protein HemY; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.755 |
| ALV26789.1 | ALV28618.1 | APZ00_06575 | APZ00_17400 | DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.668 |
| ALV26789.1 | ALV28920.1 | APZ00_06575 | APZ00_19265 | DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.475 |
| ALV26789.1 | ALV29380.1 | APZ00_06575 | APZ00_21980 | DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.455 |
| ALV26789.1 | ALV29382.1 | APZ00_06575 | APZ00_21990 | DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cell envelope protein SmpA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.714 |
| ALV26789.1 | lptD | APZ00_06575 | APZ00_18900 | DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. | Organic solvent tolerance protein OstA; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.528 |
| ALV26844.1 | ALV26789.1 | APZ00_06905 | APZ00_06575 | Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.591 |
| ALV26844.1 | ALV27016.1 | APZ00_06905 | APZ00_07975 | Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Heme biosynthesis protein HemY; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.627 |
| ALV26844.1 | ALV28618.1 | APZ00_06905 | APZ00_17400 | Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.597 |
| ALV26844.1 | ALV28920.1 | APZ00_06905 | APZ00_19265 | Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.501 |
| ALV26844.1 | ALV29382.1 | APZ00_06905 | APZ00_21990 | Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Cell envelope protein SmpA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.789 |
| ALV26844.1 | ALV30243.1 | APZ00_06905 | APZ00_19260 | Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.418 |
| ALV26844.1 | bamA | APZ00_06905 | APZ00_17650 | Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.516 |
| ALV26844.1 | bamD | APZ00_06905 | APZ00_14410 | Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Outer membrane assembly lipoprotein YfiO; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.471 |
| ALV26844.1 | lptD | APZ00_06905 | APZ00_18900 | Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Organic solvent tolerance protein OstA; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.767 |
| ALV27016.1 | ALV26789.1 | APZ00_07975 | APZ00_06575 | Heme biosynthesis protein HemY; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.755 |
| ALV27016.1 | ALV26844.1 | APZ00_07975 | APZ00_06905 | Heme biosynthesis protein HemY; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.627 |
| ALV27016.1 | ALV28618.1 | APZ00_07975 | APZ00_17400 | Heme biosynthesis protein HemY; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.629 |
| ALV27016.1 | ALV28920.1 | APZ00_07975 | APZ00_19265 | Heme biosynthesis protein HemY; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.515 |
page 1 of 4