STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALV29690.1Lauroyl acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)    
Predicted Functional Partners:
ALV29691.1
Lipid kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.971
ALV29692.1
Lipid kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.953
ALV29687.1
Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.928
ALV29689.1
Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.916
ALV29688.1
Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.905
ALV29686.1
Catalyzes the hydrolysis of allophanate; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.902
ALV27712.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.840
ALV27114.1
Molybdenum ABC transporter permease; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
    
 0.805
ALV27714.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.659
ALV27713.1
Bicarbonate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.656
Your Current Organism:
Pannonibacter phragmitetus
NCBI taxonomy Id: 121719
Other names: Achromobacter group B, Achromobacter group E, Achromobacter sp. LMG 5410, Achromobacter sp. LMG 5411, Achromobacter sp. LMG 5430, Achromobacter sp. LMG 5431, DSM 14782, LMG 22736, LMG:22736, NCAIM B02025, NCTC 13350, P. phragmitetus, Pannonibacter phragmitetus Borsodi et al. 2003, alpha proteobacterium C6-19, alpha proteobacterium C6/17, alpha proteobacterium C6/8, strain C6/19
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