STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
KTB47871.1Putative membrane protein; Pfam: Rhomboid family. (189 aa)    
Predicted Functional Partners:
KTB48021.1
Membrane protease subunit, stomatin/prohibitin-like protein; SMART: prohibitin homologues; Pfam: SPFH domain / Band 7 family; PRINTS: Stomatin signature.
   
 0.739
KTB48700.1
Pfam: SPFH domain / Band 7 family; SMART: prohibitin homologues; PRINTS: Stomatin signature.
   
 0.739
ftsH
Membrane protease FtsH catalytic subunit; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 
 0.711
tatA
Twin arginine-targeting protein translocase, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
   
 
 0.663
KTB47640.1
Pfam: mttA/Hcf106 family; PRINTS: Bacterial sec-independent translocation TatB protein signature.
   
 
 0.663
tatA-2
Twin arginine-targeting protein translocase, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
   
 
 0.663
KTB47639.1
Pfam: mttA/Hcf106 family.
   
 
 0.618
KTB47870.1
SMART: cheY-homologous receiver domain; Pfam: Response regulator receiver domain.
       0.605
KTB47873.1
PAS/PAC sensor signal transduction histidine kinase; 'SMART: His Kinase A (phosphoacceptor) domain; SMART: PAS domain; Pfam: His Kinase A (phospho-acceptor) domain; PRINTS: Bacterial sensor protein C-terminal signature; Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; SMART: Histidine kinase-like ATPases; TIGRFAM: sensory_box: PAS domain S-box protein; Pfam: PAS fold'.
       0.573
KTB47872.1
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; 'Pfam: Transcriptional regulatory protein, C terminal; SMART: cheY-homologous receiver domain; SMART: Transcriptional regulatory protein, C terminal; Pfam: Response regulator receiver domain'.
       0.571
Your Current Organism:
Dehalogenimonas alkenigignens
NCBI taxonomy Id: 1217799
Other names: D. alkenigignens, Dehalogenimonas alkenigignens Bowman et al. 2013 emend. Key et al. 2017, Dehalogenimonas sp. IP3-3, Dehalogenimonas sp. SBP1, JCM 17062, NRRL B-59545, strain IP3-3
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