STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KTB48402.1Pfam: Major Facilitator Superfamily. (475 aa)    
Predicted Functional Partners:
KTB48403.1
Arsenite efflux membrane protein ArsB; Pfam: Arsenical pump membrane protein; PRINTS: Arsenical pump membrane protein signature.
 
    0.815
KTB48398.1
Pfam: Acetyltransferase (GNAT) family.
       0.523
KTB48399.1
D-alanine-D-alanine ligase or related ATP-grasp enzyme; Pfam: D-ala D-ala ligase C-terminus.
       0.523
KTB48400.1
D-alanine-D-alanine ligase or related ATP-grasp enzyme; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
       0.523
KTB48401.1
Lysine 2,3-aminomutase; 'Pfam: Radical SAM superfamily; Pfam: 4Fe-4S single cluster domain; Pfam: Lysine-2,3-aminomutase; TIGRFAM: TIGR00238: KamA family protein'.
       0.523
Your Current Organism:
Dehalogenimonas alkenigignens
NCBI taxonomy Id: 1217799
Other names: D. alkenigignens, Dehalogenimonas alkenigignens Bowman et al. 2013 emend. Key et al. 2017, Dehalogenimonas sp. IP3-3, Dehalogenimonas sp. SBP1, JCM 17062, NRRL B-59545, strain IP3-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.