STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000684975_00350Unannotated protein. (611 aa)    
Predicted Functional Partners:
GCA_000684975_00351
Unannotated protein.
 
 0.998
GCA_000684975_00891
Unannotated protein.
 
 
0.989
GCA_000684975_04599
Unannotated protein.
  
 0.989
GCA_000684975_02286
Unannotated protein.
  
 0.988
GCA_000684975_00890
Unannotated protein.
 
 
0.986
GCA_000684975_00888
Unannotated protein.
  
 
 0.982
GCA_000684975_05357
Unannotated protein.
  
 0.982
GCA_000684975_00663
Unannotated protein.
 
 0.968
GCA_000684975_05297
Unannotated protein.
 
0.964
GCA_000684975_02882
Unannotated protein.
  
 
 0.959
Your Current Organism:
Paraburkholderia acidipaludis
NCBI taxonomy Id: 1218074
Other names: Burkholderia acidipaludis NBRC 101816, Burkholderia acidipaludis SA33, Burkholderia sp. SA33, P. acidipaludis NBRC 101816, Paraburkholderia acidipaludis NBRC 101816
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.