STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000685035_04578Unannotated protein. (153 aa)    
Predicted Functional Partners:
GCA_000685035_02107
Unannotated protein.
   
 0.990
GCA_000685035_04579
Unannotated protein.
  
  
 0.986
GCA_000685035_07249
Unannotated protein.
   
  0.980
GCA_000685035_04286
Unannotated protein.
  
 
  0.963
GCA_000685035_03335
Unannotated protein.
   
  0.958
GCA_000685035_07193
Unannotated protein.
   
  0.958
GCA_000685035_00071
Unannotated protein.
    
  0.957
GCA_000685035_00315
Unannotated protein.
    
  0.957
GCA_000685035_01351
Unannotated protein.
 
 
 0.957
GCA_000685035_01543
Unannotated protein.
   
  0.957
Your Current Organism:
Paraburkholderia ferrariae
NCBI taxonomy Id: 1218076
Other names: Burkholderia ferrariae NBRC 106233, P. ferrariae NBRC 106233, Paraburkholderia ferrariae NBRC 106233
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.