STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000739735_00848Unannotated protein. (441 aa)    
Predicted Functional Partners:
GCA_000739735_05006
Unannotated protein.
     
 0.930
GCA_000739735_00604
Unannotated protein.
     
 0.916
GCA_000739735_04332
Unannotated protein.
     
 0.916
GCA_000739735_04487
Unannotated protein.
     
 0.916
GCA_000739735_00849
Unannotated protein.
 
     0.808
GCA_000739735_00850
Unannotated protein.
  
    0.788
GCA_000739735_02366
Unannotated protein.
  
 
 0.777
GCA_000739735_05816
Unannotated protein.
 
 
 0.756
GCA_000739735_02365
Unannotated protein.
 
  
 0.732
GCA_000739735_00412
Unannotated protein.
  
 
 0.724
Your Current Organism:
Paraburkholderia ginsengisoli
NCBI taxonomy Id: 1218078
Other names: Burkholderia ginsengisoli NBRC 100965, P. ginsengisoli NBRC 100965, Paraburkholderia ginsengisoli NBRC 100965
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.