STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000739735_02757Unannotated protein. (409 aa)    
Predicted Functional Partners:
GCA_000739735_00686
Unannotated protein.
  
  
 
0.887
GCA_000739735_03899
Unannotated protein.
  
  
 
0.886
GCA_000739735_03687
Unannotated protein.
  
  
 
0.885
GCA_000739735_01962
Unannotated protein.
  
  
 
0.882
GCA_000739735_03041
Unannotated protein.
  
  
 
0.882
GCA_000739735_03233
Unannotated protein.
  
  
 
0.881
GCA_000739735_03343
Unannotated protein.
  
  
 
0.880
GCA_000739735_02112
Unannotated protein.
  
  
 
0.879
GCA_000739735_02842
Unannotated protein.
  
  
 
0.879
GCA_000739735_02931
Unannotated protein.
  
  
 
0.879
Your Current Organism:
Paraburkholderia ginsengisoli
NCBI taxonomy Id: 1218078
Other names: Burkholderia ginsengisoli NBRC 100965, P. ginsengisoli NBRC 100965, Paraburkholderia ginsengisoli NBRC 100965
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.