STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000739735_04572Unannotated protein. (234 aa)    
Predicted Functional Partners:
GCA_000739735_04571
Unannotated protein.
 
     0.823
GCA_000739735_01826
Unannotated protein.
 
     0.802
GCA_000739735_00213
Unannotated protein.
 
 
 0.795
GCA_000739735_04424
Unannotated protein.
 
 
 0.793
GCA_000739735_01473
Unannotated protein.
   
 0.754
GCA_000739735_00456
Unannotated protein.
   
 0.701
GCA_000739735_00457
Unannotated protein.
   
 0.701
GCA_000739735_04107
Unannotated protein.
   
 0.701
GCA_000739735_04271
Unannotated protein.
   
 0.701
GCA_000739735_04802
Unannotated protein.
   
 0.701
Your Current Organism:
Paraburkholderia ginsengisoli
NCBI taxonomy Id: 1218078
Other names: Burkholderia ginsengisoli NBRC 100965, P. ginsengisoli NBRC 100965, Paraburkholderia ginsengisoli NBRC 100965
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.