STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001544295_02079Unannotated protein. (396 aa)    
Predicted Functional Partners:
GCA_001544295_02080
Unannotated protein.
 
  
 0.948
GCA_001544295_02081
Unannotated protein.
 
  
 0.947
GCA_001544295_02084
Unannotated protein.
 
  
 0.869
GCA_001544295_02088
Unannotated protein.
 
    0.861
GCA_001544295_02086
Unannotated protein.
 
     0.859
GCA_001544295_02085
Unannotated protein.
 
     0.856
CF160_03535
Unannotated protein.
 
   
 0.836
CF160_02915
Unannotated protein.
 
  
 0.830
GCA_001544295_02087
Unannotated protein.
 
     0.828
CF160_02910
Unannotated protein.
 
  
 0.810
Your Current Organism:
Enterococcus pseudoavium
NCBI taxonomy Id: 1218092
Other names: E. pseudoavium NBRC 100491, Enterococcus pseudoavium NBRC 100491
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.