STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LY56_01810Unannotated protein. (920 aa)    
Predicted Functional Partners:
LY56_00965
Unannotated protein.
  
     0.773
LY56_00715
Unannotated protein.
  
     0.771
LY56_00370
Unannotated protein.
  
     0.767
LY56_02474
Unannotated protein.
  
     0.766
LY56_00460
Unannotated protein.
  
     0.766
LY56_00236
Unannotated protein.
  
     0.746
LY56_00895
Unannotated protein.
  
     0.739
LY56_02202
Unannotated protein.
  
     0.725
LY56_02247
Unannotated protein.
  
     0.722
LY56_00258
Unannotated protein.
  
     0.721
Your Current Organism:
Roseinatronobacter thiooxidans
NCBI taxonomy Id: 121821
Other names: DSM 13087, R. thiooxidans, Roseinatronobacter thiooxidans Sorokin et al. 2000, strain ALG 1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.