Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LY56_00055 | LY56_00730 | GCA_001870675_02127 | GCA_001870675_02493 | Unannotated protein. | Unannotated protein. | 0.695 |
LY56_00055 | msrA-2 | GCA_001870675_02127 | GCA_001870675_03130 | Unannotated protein. | Unannotated protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.967 |
LY56_00055 | msrB | GCA_001870675_02127 | GCA_001870675_01842 | Unannotated protein. | Unannotated protein. | 0.695 |
LY56_00471 | msrA-2 | GCA_001870675_02752 | GCA_001870675_03130 | Unannotated protein; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Unannotated protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.727 |
LY56_00730 | LY56_00055 | GCA_001870675_02493 | GCA_001870675_02127 | Unannotated protein. | Unannotated protein. | 0.695 |
LY56_00730 | LY56_02937 | GCA_001870675_02493 | GCA_001870675_01474 | Unannotated protein. | Unannotated protein. | 0.799 |
LY56_00730 | msrA-2 | GCA_001870675_02493 | GCA_001870675_03130 | Unannotated protein. | Unannotated protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.986 |
LY56_01395 | msrA-2 | GCA_001870675_00184 | GCA_001870675_03130 | Unannotated protein. | Unannotated protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.626 |
LY56_02134 | msrA-2 | GCA_001870675_00539 | GCA_001870675_03130 | Unannotated protein. | Unannotated protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.717 |
LY56_02160 | msrA-2 | GCA_001870675_00566 | GCA_001870675_03130 | Unannotated protein; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins. | Unannotated protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.626 |
LY56_02937 | LY56_00730 | GCA_001870675_01474 | GCA_001870675_02493 | Unannotated protein. | Unannotated protein. | 0.799 |
LY56_02937 | msrA-2 | GCA_001870675_01474 | GCA_001870675_03130 | Unannotated protein. | Unannotated protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.979 |
LY56_02937 | msrB | GCA_001870675_01474 | GCA_001870675_01842 | Unannotated protein. | Unannotated protein. | 0.799 |
LY56_02937 | polA | GCA_001870675_01474 | GCA_001870675_02432 | Unannotated protein. | Unannotated protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.521 |
msrA-2 | LY56_00055 | GCA_001870675_03130 | GCA_001870675_02127 | Unannotated protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | Unannotated protein. | 0.967 |
msrA-2 | LY56_00471 | GCA_001870675_03130 | GCA_001870675_02752 | Unannotated protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | Unannotated protein; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.727 |
msrA-2 | LY56_00730 | GCA_001870675_03130 | GCA_001870675_02493 | Unannotated protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | Unannotated protein. | 0.986 |
msrA-2 | LY56_01395 | GCA_001870675_03130 | GCA_001870675_00184 | Unannotated protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | Unannotated protein. | 0.626 |
msrA-2 | LY56_02134 | GCA_001870675_03130 | GCA_001870675_00539 | Unannotated protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | Unannotated protein. | 0.717 |
msrA-2 | LY56_02160 | GCA_001870675_03130 | GCA_001870675_00566 | Unannotated protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | Unannotated protein; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins. | 0.626 |
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