LOC103508470 protein (Diaphorina citri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC103508470

Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (261 aa)

Predicted Functional Partners:

LOC103511407

0.984

LOC103516471

0.984

LOC103524844

0.984

LOC113473732

0.984

LOC103516948

0.975

LOC103516954

0.975

LOC103514868

0.975

LOC103520879

0.974

LOC103523437

0.972

LOC103524748

0.972

Your Current Organism:

Diaphorina citri

NCBI taxonomy Id: 121845
Other names: Asian citrus psyllid, D. citri

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103508470	LOC103511407	A0A1S3D020	A0A1S3D4P1	Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.	RING-box protein 1A isoform X1.	0.984
LOC103508470	LOC103514868	A0A1S3D020	A0A3Q0J9X0	Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.	Cullin-1-like; Belongs to the cullin family.	0.975
LOC103508470	LOC103516471	A0A1S3D020	A0A1S3DDN0	Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.	NEDD8-conjugating enzyme Ubc12; Belongs to the ubiquitin-conjugating enzyme family.	0.984
LOC103508470	LOC103516948	A0A1S3D020	A0A1S3DER0	Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.	Cullin homolog 1-like.	0.975
LOC103508470	LOC103516954	A0A1S3D020	A0A1S4EKQ3	Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.	Cullin-1; Belongs to the cullin family.	0.975
LOC103508470	LOC103520879	A0A1S3D020	A0A1S3DLX9	Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.	Cullin-5; Belongs to the cullin family.	0.974
LOC103508470	LOC103523437	A0A1S3D020	A0A1S3DS47	Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.	LOW QUALITY PROTEIN: NEDD8-like.	0.972
LOC103508470	LOC103524748	A0A1S3D020	A0A1S3DU76	Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.	NEDD8.	0.972
LOC103508470	LOC103524844	A0A1S3D020	A0A1S3DUZ9	Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.	RING-box protein pip1-like.	0.984
LOC103508470	LOC113473732	A0A1S3D020	A0A3Q0JKS2	Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.	NEDD8-conjugating enzyme UBE2F-like; Belongs to the ubiquitin-conjugating enzyme family.	0.984
LOC103511407	LOC103508470	A0A1S3D4P1	A0A1S3D020	RING-box protein 1A isoform X1.	Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.	0.984
LOC103511407	LOC103514868	A0A1S3D4P1	A0A3Q0J9X0	RING-box protein 1A isoform X1.	Cullin-1-like; Belongs to the cullin family.	0.978
LOC103511407	LOC103516471	A0A1S3D4P1	A0A1S3DDN0	RING-box protein 1A isoform X1.	NEDD8-conjugating enzyme Ubc12; Belongs to the ubiquitin-conjugating enzyme family.	0.980
LOC103511407	LOC103516948	A0A1S3D4P1	A0A1S3DER0	RING-box protein 1A isoform X1.	Cullin homolog 1-like.	0.978
LOC103511407	LOC103516954	A0A1S3D4P1	A0A1S4EKQ3	RING-box protein 1A isoform X1.	Cullin-1; Belongs to the cullin family.	0.978
LOC103511407	LOC103520879	A0A1S3D4P1	A0A1S3DLX9	RING-box protein 1A isoform X1.	Cullin-5; Belongs to the cullin family.	0.993
LOC103511407	LOC103523437	A0A1S3D4P1	A0A1S3DS47	RING-box protein 1A isoform X1.	LOW QUALITY PROTEIN: NEDD8-like.	0.988
LOC103511407	LOC103524748	A0A1S3D4P1	A0A1S3DU76	RING-box protein 1A isoform X1.	NEDD8.	0.988
LOC103511407	LOC113473732	A0A1S3D4P1	A0A3Q0JKS2	RING-box protein 1A isoform X1.	NEDD8-conjugating enzyme UBE2F-like; Belongs to the ubiquitin-conjugating enzyme family.	0.980
LOC103514868	LOC103508470	A0A3Q0J9X0	A0A1S3D020	Cullin-1-like; Belongs to the cullin family.	Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.	0.975