STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103511144Rab3 GTPase-activating protein catalytic subunit. (116 aa)    
Predicted Functional Partners:
LOC103516064
Rab3 GTPase-activating protein regulatory subunit-like.
   
 0.916
LOC113470268
Rab3 GTPase-activating protein non-catalytic subunit-like.
   
 0.916
LOC103507823
Rab proteins geranylgeranyltransferase component A 1.
   
 
 0.603
LOC103523483
Dynactin subunit 4-like.
   
 
  0.592
LOC103505819
Dynactin subunit 4.
   
 
  0.592
LOC103517990
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
     
 0.580
LOC103520620
Dynactin subunit 5.
   
 
  0.580
LOC103505719
Ras-related protein Rab6.
     
 0.575
LOC103505720
Ras-related protein Rab6-like.
     
 0.575
LOC103507528
Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes.
   
 
 0.572
Your Current Organism:
Diaphorina citri
NCBI taxonomy Id: 121845
Other names: Asian citrus psyllid, D. citri
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