LOC103511085 protein (Diaphorina citri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC103511085

60S ribosomal protein L5. (305 aa)

Predicted Functional Partners:

Rpl17

0.999

LOC103505561

0.999

LOC103505979

0.999

LOC103506399

0.999

LOC103506570

0.999

LOC103506660

0.999

LOC103506989

0.999

LOC103508494

0.999

LOC103509150

0.999

LOC103508849

0.999

Your Current Organism:

Diaphorina citri

NCBI taxonomy Id: 121845
Other names: Asian citrus psyllid, D. citri

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103505561	LOC103505979	A0A1S3CUK5	A0A1S3CVI1	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	60S ribosomal protein L21.	0.999
LOC103505561	LOC103506399	A0A1S3CUK5	A0A1S3CW20	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Uncharacterized protein LOC103506399 isoform X1.	0.997
LOC103505561	LOC103506570	A0A1S3CUK5	A0A1S3CWE0	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	0.998
LOC103505561	LOC103506660	A0A1S3CUK5	A0A1S3CWJ8	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	39S ribosomal protein L22, mitochondrial; Belongs to the universal ribosomal protein uL22 family.	0.992
LOC103505561	LOC103506989	A0A1S3CUK5	A0A1S3CX58	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.	0.998
LOC103505561	LOC103508494	A0A1S3CUK5	A0A1S3CZX6	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	60S ribosomal protein L14.	0.999
LOC103505561	LOC103508849	A0A1S3CUK5	A0A1S3D1W7	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Eukaryotic translation initiation factor 5A.	0.990
LOC103505561	LOC103509150	A0A1S3CUK5	A0A1S3D101	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	39S ribosomal protein L11, mitochondrial; Belongs to the universal ribosomal protein uL11 family.	0.991
LOC103505561	LOC103511085	A0A1S3CUK5	A0A1S3D5P5	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	60S ribosomal protein L5.	0.999
LOC103505561	Rpl17	A0A1S3CUK5	A0A1S2X8S3	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	60S ribosomal protein L17 isoform X1; Belongs to the universal ribosomal protein uL22 family.	0.998
LOC103505979	LOC103505561	A0A1S3CVI1	A0A1S3CUK5	60S ribosomal protein L21.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.999
LOC103505979	LOC103506399	A0A1S3CVI1	A0A1S3CW20	60S ribosomal protein L21.	Uncharacterized protein LOC103506399 isoform X1.	0.999
LOC103505979	LOC103506570	A0A1S3CVI1	A0A1S3CWE0	60S ribosomal protein L21.	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	0.999
LOC103505979	LOC103506660	A0A1S3CVI1	A0A1S3CWJ8	60S ribosomal protein L21.	39S ribosomal protein L22, mitochondrial; Belongs to the universal ribosomal protein uL22 family.	0.999
LOC103505979	LOC103506989	A0A1S3CVI1	A0A1S3CX58	60S ribosomal protein L21.	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.	0.999
LOC103505979	LOC103508494	A0A1S3CVI1	A0A1S3CZX6	60S ribosomal protein L21.	60S ribosomal protein L14.	0.999
LOC103505979	LOC103508849	A0A1S3CVI1	A0A1S3D1W7	60S ribosomal protein L21.	Eukaryotic translation initiation factor 5A.	0.999
LOC103505979	LOC103509150	A0A1S3CVI1	A0A1S3D101	60S ribosomal protein L21.	39S ribosomal protein L11, mitochondrial; Belongs to the universal ribosomal protein uL11 family.	0.999
LOC103505979	LOC103511085	A0A1S3CVI1	A0A1S3D5P5	60S ribosomal protein L21.	60S ribosomal protein L5.	0.999
LOC103505979	Rpl17	A0A1S3CVI1	A0A1S2X8S3	60S ribosomal protein L21.	60S ribosomal protein L17 isoform X1; Belongs to the universal ribosomal protein uL22 family.	0.999