LOC108254315 protein (Diaphorina citri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC108254315

Endosomal protein P24B-like. (75 aa)

Predicted Functional Partners:

LOC103509321

0.621

LOC103516977

0.606

LOC113468060

0.606

LOC103523885

0.554

LOC103518227

0.554

LOC103505643

0.542

LOC103507155

0.538

LOC103517266

0.535

LOC103511482

0.474

LOC103518697

0.474

Your Current Organism:

Diaphorina citri

NCBI taxonomy Id: 121845
Other names: Asian citrus psyllid, D. citri

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103505643	LOC103507155	A0A1S3CUS6	A0A3Q0IU51	Osteopetrosis-associated transmembrane protein 1.	LARGE xylosyl- and glucuronyltransferase 2-like.	0.552
LOC103505643	LOC103517266	A0A1S3CUS6	A0A1S3DF64	Osteopetrosis-associated transmembrane protein 1.	Ubiquitin-fold modifier 1; Ubiquitin-like modifier.	0.565
LOC103505643	LOC108254315	A0A1S3CUS6	A0A1S4ERL2	Osteopetrosis-associated transmembrane protein 1.	Endosomal protein P24B-like.	0.542
LOC103507155	LOC103505643	A0A3Q0IU51	A0A1S3CUS6	LARGE xylosyl- and glucuronyltransferase 2-like.	Osteopetrosis-associated transmembrane protein 1.	0.552
LOC103507155	LOC103517266	A0A3Q0IU51	A0A1S3DF64	LARGE xylosyl- and glucuronyltransferase 2-like.	Ubiquitin-fold modifier 1; Ubiquitin-like modifier.	0.546
LOC103507155	LOC108254315	A0A3Q0IU51	A0A1S4ERL2	LARGE xylosyl- and glucuronyltransferase 2-like.	Endosomal protein P24B-like.	0.538
LOC103509321	LOC103516977	A0A1S3D172	A0A1S4EL48	Transmembrane emp24 domain-containing protein eca.	Transmembrane emp24 domain-containing protein bai.	0.998
LOC103509321	LOC103518227	A0A1S3D172	A0A1S4EM42	Transmembrane emp24 domain-containing protein eca.	Transmembrane emp24 domain-containing protein 2-like isoform X3.	0.997
LOC103509321	LOC103523885	A0A1S3D172	A0A1S3DU49	Transmembrane emp24 domain-containing protein eca.	Transmembrane emp24 domain-containing protein-like.	0.997
LOC103509321	LOC108254315	A0A1S3D172	A0A1S4ERL2	Transmembrane emp24 domain-containing protein eca.	Endosomal protein P24B-like.	0.621
LOC103509321	LOC113468060	A0A1S3D172	A0A3Q0IW66	Transmembrane emp24 domain-containing protein eca.	Transmembrane emp24 domain-containing protein bai-like.	0.998
LOC103511482	LOC108254315	A0A3Q0IXR3	A0A1S4ERL2	Conserved oligomeric Golgi complex subunit 8.	Endosomal protein P24B-like.	0.474
LOC103516977	LOC103509321	A0A1S4EL48	A0A1S3D172	Transmembrane emp24 domain-containing protein bai.	Transmembrane emp24 domain-containing protein eca.	0.998
LOC103516977	LOC103518227	A0A1S4EL48	A0A1S4EM42	Transmembrane emp24 domain-containing protein bai.	Transmembrane emp24 domain-containing protein 2-like isoform X3.	0.995
LOC103516977	LOC103523885	A0A1S4EL48	A0A1S3DU49	Transmembrane emp24 domain-containing protein bai.	Transmembrane emp24 domain-containing protein-like.	0.995
LOC103516977	LOC108254315	A0A1S4EL48	A0A1S4ERL2	Transmembrane emp24 domain-containing protein bai.	Endosomal protein P24B-like.	0.606
LOC103517266	LOC103505643	A0A1S3DF64	A0A1S3CUS6	Ubiquitin-fold modifier 1; Ubiquitin-like modifier.	Osteopetrosis-associated transmembrane protein 1.	0.565
LOC103517266	LOC103507155	A0A1S3DF64	A0A3Q0IU51	Ubiquitin-fold modifier 1; Ubiquitin-like modifier.	LARGE xylosyl- and glucuronyltransferase 2-like.	0.546
LOC103517266	LOC108254315	A0A1S3DF64	A0A1S4ERL2	Ubiquitin-fold modifier 1; Ubiquitin-like modifier.	Endosomal protein P24B-like.	0.535
LOC103518227	LOC103509321	A0A1S4EM42	A0A1S3D172	Transmembrane emp24 domain-containing protein 2-like isoform X3.	Transmembrane emp24 domain-containing protein eca.	0.997