Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC103506026 | LOC103508978 | A0A1S3CVF3 | A0A3Q0IX37 | pre-mRNA-splicing factor RBM22. | Hepatocyte nuclear factor 4-gamma-like. | 0.758 |
LOC103506026 | LOC103517404 | A0A1S3CVF3 | A0A3Q0JE91 | pre-mRNA-splicing factor RBM22. | Ecdysone receptor-like isoform X1. | 0.780 |
LOC103508978 | LOC103506026 | A0A3Q0IX37 | A0A1S3CVF3 | Hepatocyte nuclear factor 4-gamma-like. | pre-mRNA-splicing factor RBM22. | 0.758 |
LOC103508978 | LOC103509465 | A0A3Q0IX37 | A0A1S3D1N2 | Hepatocyte nuclear factor 4-gamma-like. | Proliferation-associated protein 2G4. | 0.825 |
LOC103508978 | LOC103510952 | A0A3Q0IX37 | A0A1S3D3Y9 | Hepatocyte nuclear factor 4-gamma-like. | Mediator of RNA polymerase II transcription subunit 15; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.636 |
LOC103508978 | LOC103511607 | A0A3Q0IX37 | A0A3Q0IY68 | Hepatocyte nuclear factor 4-gamma-like. | Nuclear receptor corepressor 1. | 0.720 |
LOC103508978 | LOC103517404 | A0A3Q0IX37 | A0A3Q0JE91 | Hepatocyte nuclear factor 4-gamma-like. | Ecdysone receptor-like isoform X1. | 0.610 |
LOC103508978 | LOC103519761 | A0A3Q0IX37 | Q0PXW1 | Hepatocyte nuclear factor 4-gamma-like. | Putative ribosomal protein L9. | 0.707 |
LOC103508978 | LOC103520339 | A0A3Q0IX37 | A0A3Q0JKE9 | Hepatocyte nuclear factor 4-gamma-like. | ABC transporter H family member 2. | 0.635 |
LOC103508978 | LOC103520947 | A0A3Q0IX37 | A0A1S3DM28 | Hepatocyte nuclear factor 4-gamma-like. | Uncharacterized protein DDB_G0271670-like isoform X1. | 0.720 |
LOC103508978 | LOC103524685 | A0A3Q0IX37 | A0A3Q0II22 | Hepatocyte nuclear factor 4-gamma-like. | Uncharacterized protein LOC103524685. | 0.669 |
LOC103508978 | LOC108251839 | A0A3Q0IX37 | A0A1S4EP01 | Hepatocyte nuclear factor 4-gamma-like. | 60S ribosomal protein L9-like. | 0.707 |
LOC103509465 | LOC103508978 | A0A1S3D1N2 | A0A3Q0IX37 | Proliferation-associated protein 2G4. | Hepatocyte nuclear factor 4-gamma-like. | 0.825 |
LOC103509465 | LOC103519761 | A0A1S3D1N2 | Q0PXW1 | Proliferation-associated protein 2G4. | Putative ribosomal protein L9. | 0.991 |
LOC103509465 | LOC108251839 | A0A1S3D1N2 | A0A1S4EP01 | Proliferation-associated protein 2G4. | 60S ribosomal protein L9-like. | 0.991 |
LOC103510952 | LOC103508978 | A0A1S3D3Y9 | A0A3Q0IX37 | Mediator of RNA polymerase II transcription subunit 15; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Hepatocyte nuclear factor 4-gamma-like. | 0.636 |
LOC103510952 | LOC103517404 | A0A1S3D3Y9 | A0A3Q0JE91 | Mediator of RNA polymerase II transcription subunit 15; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Ecdysone receptor-like isoform X1. | 0.472 |
LOC103510952 | LOC103519761 | A0A1S3D3Y9 | Q0PXW1 | Mediator of RNA polymerase II transcription subunit 15; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Putative ribosomal protein L9. | 0.980 |
LOC103510952 | LOC108251839 | A0A1S3D3Y9 | A0A1S4EP01 | Mediator of RNA polymerase II transcription subunit 15; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 60S ribosomal protein L9-like. | 0.980 |
LOC103511607 | LOC103508978 | A0A3Q0IY68 | A0A3Q0IX37 | Nuclear receptor corepressor 1. | Hepatocyte nuclear factor 4-gamma-like. | 0.720 |
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