LOC113471399 protein (Diaphorina citri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC113471399

Uncharacterized protein LOC113471399. (272 aa)

Predicted Functional Partners:

LOC103514947

0.670

LOC113470834

0.670

LOC103513817

0.664

LOC103513965

0.664

LOC103511108

0.650

LOC113468204

0.650

LOC103523428

0.636

LOC103513529

0.629

LOC108253208

0.629

LOC103508055

0.624

Your Current Organism:

Diaphorina citri

NCBI taxonomy Id: 121845
Other names: Asian citrus psyllid, D. citri

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103508055	LOC103511108	A0A1S3CZA5	A0A1S4EDP9	Heat shock protein 83.	Endoplasmin homolog.	0.687
LOC103508055	LOC103513529	A0A1S3CZA5	A0A1S4EGT6	Heat shock protein 83.	Heat shock 70 kDa protein cognate 5 isoform X1; Belongs to the heat shock protein 70 family.	0.734
LOC103508055	LOC103513817	A0A1S3CZA5	A0A1S3D8X3	Heat shock protein 83.	LOW QUALITY PROTEIN: endoplasmic reticulum chaperone BiP-like; Belongs to the heat shock protein 70 family.	0.739
LOC103508055	LOC103513965	A0A1S3CZA5	A0A3Q0J2J1	Heat shock protein 83.	Endoplasmic reticulum chaperone BiP-like.	0.739
LOC103508055	LOC103514947	A0A1S3CZA5	A0A1S3DB18	Heat shock protein 83.	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	0.636
LOC103508055	LOC103523428	A0A1S3CZA5	A0A1S3DT73	Heat shock protein 83.	Hypoxia up-regulated protein 1-like.	0.735
LOC103508055	LOC108253208	A0A1S3CZA5	A0A1S4EJA0	Heat shock protein 83.	Uncharacterized protein LOC108253207; Belongs to the heat shock protein 70 family.	0.724
LOC103508055	LOC113468204	A0A1S3CZA5	A0A3Q0IX04	Heat shock protein 83.	Endoplasmin-like.	0.669
LOC103508055	LOC113470834	A0A1S3CZA5	A0A3Q0JFA6	Heat shock protein 83.	grpE protein homolog 1, mitochondrial-like.	0.636
LOC103508055	LOC113471399	A0A1S3CZA5	A0A3Q0JHX2	Heat shock protein 83.	Uncharacterized protein LOC113471399.	0.624
LOC103511108	LOC103508055	A0A1S4EDP9	A0A1S3CZA5	Endoplasmin homolog.	Heat shock protein 83.	0.687
LOC103511108	LOC103513529	A0A1S4EDP9	A0A1S4EGT6	Endoplasmin homolog.	Heat shock 70 kDa protein cognate 5 isoform X1; Belongs to the heat shock protein 70 family.	0.810
LOC103511108	LOC103513817	A0A1S4EDP9	A0A1S3D8X3	Endoplasmin homolog.	LOW QUALITY PROTEIN: endoplasmic reticulum chaperone BiP-like; Belongs to the heat shock protein 70 family.	0.978
LOC103511108	LOC103513965	A0A1S4EDP9	A0A3Q0J2J1	Endoplasmin homolog.	Endoplasmic reticulum chaperone BiP-like.	0.978
LOC103511108	LOC103514947	A0A1S4EDP9	A0A1S3DB18	Endoplasmin homolog.	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	0.631
LOC103511108	LOC103523428	A0A1S4EDP9	A0A1S3DT73	Endoplasmin homolog.	Hypoxia up-regulated protein 1-like.	0.944
LOC103511108	LOC108253208	A0A1S4EDP9	A0A1S4EJA0	Endoplasmin homolog.	Uncharacterized protein LOC108253207; Belongs to the heat shock protein 70 family.	0.810
LOC103511108	LOC113470834	A0A1S4EDP9	A0A3Q0JFA6	Endoplasmin homolog.	grpE protein homolog 1, mitochondrial-like.	0.631
LOC103511108	LOC113471399	A0A1S4EDP9	A0A3Q0JHX2	Endoplasmin homolog.	Uncharacterized protein LOC113471399.	0.650
LOC103513529	LOC103508055	A0A1S4EGT6	A0A1S3CZA5	Heat shock 70 kDa protein cognate 5 isoform X1; Belongs to the heat shock protein 70 family.	Heat shock protein 83.	0.734