STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JG30_00550Sugar isomerase (SIS). (186 aa)    
Predicted Functional Partners:
JG30_16060
3-hexulose-6-phosphate synthase.
 
 
 0.989
JG30_00560
Ribulose-phosphate 3-epimerase.
 
 
 0.895
JG30_15530
Transketolase; Belongs to the transketolase family.
  
 
 0.831
pfkA
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
    
 0.830
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.828
JG30_00530
PTS Fru IIA.
  
  
 0.796
JG30_00540
Mannitol-1-phosphate 5-dehydrogenase.
     
 0.785
JG30_00520
PTS Fru IICB.
     
 0.759
JG30_00570
Transcriptional regulator, DeoR family.
 
     0.577
rpiA
Ribose-5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
 
  
 0.555
Your Current Organism:
Lactobacillus mellifer
NCBI taxonomy Id: 1218492
Other names: CCUG 63291, DSM 26254, L. mellifer, Lactobacillus mellifer Olofsson et al. 2014, Lactobacillus sp. Bin4, Lactobacillus sp. Bin4N, strain Bin4N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.