STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JG30_04690CoA-dependent propionaldehyde dehydrogenase. (473 aa)    
Predicted Functional Partners:
JG30_04700
Propanol dehydrogenase PduQ.
 0.999
pduL
Phosphate propanoyltransferase; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.
  
 0.989
JG30_04580
Glycerol dehydratase medium subunit PduD.
 
 
 0.973
JG30_04590
Glycerol dehydratase small subunit.
 
 
 0.973
JG30_04570
Glycerol dehydratase large subunit.
 
 
 0.968
JG30_15370
PTS Glc IIBCA.
   
 
 0.963
JG30_10720
Phosphate acetyltransferase (Phosphotransacetylase).
  
 
 0.936
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.917
JG30_04660
Propanediol utilization protein PduN.
 
  
 0.916
JG30_16410
2-hydroxy-3-oxopropionate reductase.
  
 
 0.908
Your Current Organism:
Lactobacillus mellifer
NCBI taxonomy Id: 1218492
Other names: CCUG 63291, DSM 26254, L. mellifer, Lactobacillus mellifer Olofsson et al. 2014, Lactobacillus sp. Bin4, Lactobacillus sp. Bin4N, strain Bin4N
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