STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JG30_08600Putative D-methionine transport system permease protein metI. (229 aa)    
Predicted Functional Partners:
JG30_01550
NLPA lipoprotein.
 0.999
metN
ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 0.999
plpB
Lipoprotein; Belongs to the nlpA lipoprotein family.
 0.999
JG30_14480
ABC-type antimicrobial peptide transport system, ATPase component.
   
  0.462
JG30_13480
ABC transporter, ATP-binding protein.
   
  0.446
JG30_06250
Hypothetical protein.
    
 0.436
ysaC
ABC superfamily ATP binding cassette transporter ABC protein.
   
  0.430
JG30_16420
ABC transporter family protein.
    
  0.425
JG30_15370
PTS Glc IIBCA.
     
 0.414
JG30_01760
Lipopolysaccharide export system ATP-binding protein lptB.
    
  0.409
Your Current Organism:
Lactobacillus mellifer
NCBI taxonomy Id: 1218492
Other names: CCUG 63291, DSM 26254, L. mellifer, Lactobacillus mellifer Olofsson et al. 2014, Lactobacillus sp. Bin4, Lactobacillus sp. Bin4N, strain Bin4N
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