STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JG30_09080PTS Fru IIABC. (648 aa)    
Predicted Functional Partners:
pfkB
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
 0.999
JG30_15370
PTS Glc IIBCA.
 
 
0.999
JG30_15740
PTS Fru IIA.
 
 
 0.999
JG30_15940
Tagatose-6-phosphate kinase / 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
 0.999
JG30_16080
PTS Fru IIA.
 
 
0.999
ptsI
Phosphoenolpyruvate-protein phosphotransferase, EI; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).
 
 
 0.998
JG30_11560
Phosphocarrier protein HPr.
  
 
 0.997
JG30_02060
PTS Man IICD.
  
 
 0.996
JG30_00460
PTS IIA domain transcriptional regulator.
  
 
 0.983
JG30_00950
PTS IIA domain transcriptional regulator.
  
 
 0.983
Your Current Organism:
Lactobacillus mellifer
NCBI taxonomy Id: 1218492
Other names: CCUG 63291, DSM 26254, L. mellifer, Lactobacillus mellifer Olofsson et al. 2014, Lactobacillus sp. Bin4, Lactobacillus sp. Bin4N, strain Bin4N
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