STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JG30_10600Hypothetical protein. (333 aa)    
Predicted Functional Partners:
JG30_10610
Putative ComG operon protein 1.
 
 
 0.998
JG30_10590
Uncharacterized protein.
  
  
 0.980
JG30_10580
Hypothetical protein.
  
  
 0.978
JG30_09240
Hypothetical protein.
 
  
 0.841
JG30_13550
Hypothetical protein.
 
  
 0.830
JG30_09250
Hypothetical protein.
  
  
 0.811
JG30_10570
Hypothetical protein.
       0.773
JG30_00480
Peptidoglycan binding protein.
    
   0.752
JG30_11090
Competence protein ComFA.
   
  
 0.738
JG30_10550
N-6 DNA Methylase.
 
     0.723
Your Current Organism:
Lactobacillus mellifer
NCBI taxonomy Id: 1218492
Other names: CCUG 63291, DSM 26254, L. mellifer, Lactobacillus mellifer Olofsson et al. 2014, Lactobacillus sp. Bin4, Lactobacillus sp. Bin4N, strain Bin4N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.