STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JF76_00710ABC-type uncharacterized transport system, permease component. (256 aa)    
Predicted Functional Partners:
JF76_00720
Putative integral membrane transport protein.
 
  
 0.963
JF76_00700
ATP-binding transport protein natA ABC transporter.
 
     0.949
JF76_06910
ATP-binding protein.
 
  
 0.898
JF76_06930
Multidrug efflux associated membrane protein.
 
  
 0.828
JF76_17400
ABC transporter.
  
     0.653
JF76_00520
Transcriptional regulator.
  
     0.607
JF76_19090
Hypothetical protein.
  
     0.560
JF76_12920
Alpha/beta hydrolase family protein.
  
     0.535
JF76_15860
Putative S-layer protein.
  
     0.529
JF76_00690
Uncharacterized protein.
       0.488
Your Current Organism:
Lactobacillus kullabergensis
NCBI taxonomy Id: 1218493
Other names: CCUG 63631, DSM 26262, L. kullabergensis, Lactobacillus kullabergensis Olofsson et al. 2014, Lactobacillus sp. Biut2, Lactobacillus sp. Biut2N, Lactobacillus sp. ESL0186, Lactobacillus sp. H6HS21N, strain Biut2N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.