STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JF76_00800Hypothetical protein. (496 aa)    
Predicted Functional Partners:
fbaA
Fructose-bisphosphate aldolase.
  
  
 0.606
JF76_00780
Uncharacterized protein.
  
  
 0.575
JF76_03930
Uncharacterized protein.
  
  
 0.539
JF76_06460
Uncharacterized protein.
  
  
 0.539
JF76_05920
Phosphocarrier protein HPr.
    
 
 0.513
JF76_00760
PTS Gut IIB.
 
   
 0.508
JF76_15820
Hypothetical protein.
 
 
 
 0.508
JF76_00770
Hypothetical protein.
  
    0.507
JF76_00750
PTS Gut IIC.
 
  
 0.504
JF76_13930
CDF family cation diffusion facilitator; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
  
    0.477
Your Current Organism:
Lactobacillus kullabergensis
NCBI taxonomy Id: 1218493
Other names: CCUG 63631, DSM 26262, L. kullabergensis, Lactobacillus kullabergensis Olofsson et al. 2014, Lactobacillus sp. Biut2, Lactobacillus sp. Biut2N, Lactobacillus sp. ESL0186, Lactobacillus sp. H6HS21N, strain Biut2N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.