STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JF76_01780Uncharacterized protein. (213 aa)    
Predicted Functional Partners:
JF76_01990
Short-chain dehydrogenase/oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 0.834
JF76_14910
ABC-type multidrug transport system, permease component.
  
  
 0.538
JF76_01770
Uncharacterized protein.
       0.530
JF76_06980
Uncharacterized protein.
  
  
 0.524
ribA
GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
  
 
 0.523
JF76_10170
Hypothetical protein.
  
  
 0.512
tadA
Cytidine/deoxycytidylate deaminase family protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
  
  
 0.512
JF76_18990
Metal-dependent membrane protease.
  
  
 0.512
JF76_05270
Hypothetical protein.
  
  
 0.498
JF76_00510
ABC superfamily ATP binding cassette transporter ABC protein.
 
  
 0.408
Your Current Organism:
Lactobacillus kullabergensis
NCBI taxonomy Id: 1218493
Other names: CCUG 63631, DSM 26262, L. kullabergensis, Lactobacillus kullabergensis Olofsson et al. 2014, Lactobacillus sp. Biut2, Lactobacillus sp. Biut2N, Lactobacillus sp. ESL0186, Lactobacillus sp. H6HS21N, strain Biut2N
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.