Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
JF76_00600 | JF76_04290 | JF76_00600 | JF76_04290 | PTS Glc IIABC. | PTS Glc IIABC. | 0.999 |
JF76_00600 | JF76_04370 | JF76_00600 | JF76_04370 | PTS Glc IIABC. | PTS Fru IIABC. | 0.907 |
JF76_00600 | JF76_05920 | JF76_00600 | JF76_05920 | PTS Glc IIABC. | Phosphocarrier protein HPr. | 0.983 |
JF76_00600 | JF76_08150 | JF76_00600 | JF76_08150 | PTS Glc IIABC. | PTS Glc IIABC. | 0.999 |
JF76_00600 | JF76_08230 | JF76_00600 | JF76_08230 | PTS Glc IIABC. | PTS Glc IIABC. | 0.999 |
JF76_00600 | JF76_14840 | JF76_00600 | JF76_14840 | PTS Glc IIABC. | PTS Glc IIA. | 0.673 |
JF76_00600 | JF76_16550 | JF76_00600 | JF76_16550 | PTS Glc IIABC. | PTS Fru IIABC. | 0.907 |
JF76_00600 | JF76_17700 | JF76_00600 | JF76_17700 | PTS Glc IIABC. | PTS Glc IIABC. | 0.999 |
JF76_00600 | JF76_18650 | JF76_00600 | JF76_18650 | PTS Glc IIABC. | PTS Glc IIABC. | 0.999 |
JF76_00600 | ptsP | JF76_00600 | JF76_05930 | PTS Glc IIABC. | Phosphoenolpyruvate-protein phosphotransferase, EI; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr). | 0.861 |
JF76_04290 | JF76_00600 | JF76_04290 | JF76_00600 | PTS Glc IIABC. | PTS Glc IIABC. | 0.999 |
JF76_04290 | JF76_04370 | JF76_04290 | JF76_04370 | PTS Glc IIABC. | PTS Fru IIABC. | 0.907 |
JF76_04290 | JF76_05920 | JF76_04290 | JF76_05920 | PTS Glc IIABC. | Phosphocarrier protein HPr. | 0.983 |
JF76_04290 | JF76_08150 | JF76_04290 | JF76_08150 | PTS Glc IIABC. | PTS Glc IIABC. | 0.999 |
JF76_04290 | JF76_08230 | JF76_04290 | JF76_08230 | PTS Glc IIABC. | PTS Glc IIABC. | 0.999 |
JF76_04290 | JF76_14840 | JF76_04290 | JF76_14840 | PTS Glc IIABC. | PTS Glc IIA. | 0.670 |
JF76_04290 | JF76_16550 | JF76_04290 | JF76_16550 | PTS Glc IIABC. | PTS Fru IIABC. | 0.907 |
JF76_04290 | JF76_17700 | JF76_04290 | JF76_17700 | PTS Glc IIABC. | PTS Glc IIABC. | 0.999 |
JF76_04290 | JF76_18650 | JF76_04290 | JF76_18650 | PTS Glc IIABC. | PTS Glc IIABC. | 0.999 |
JF76_04290 | ptsP | JF76_04290 | JF76_05930 | PTS Glc IIABC. | Phosphoenolpyruvate-protein phosphotransferase, EI; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr). | 0.855 |
page 1 of 6