STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JF76_15820Hypothetical protein. (327 aa)    
Predicted Functional Partners:
JF76_15830
N-acetylmannosamine kinase.
  
  
 0.793
JF76_00460
Hypothetical protein.
  
     0.775
JF76_15810
Alpha-L-fucosidase.
       0.773
JF76_17990
LacI family transcriptional regulator.
  
     0.767
JF76_15840
Beta-glucosidase/6-phospho-beta- glucosidase/beta- galactosidase; Belongs to the glycosyl hydrolase 1 family.
     
 0.761
Pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
 
 0.672
JF76_05920
Phosphocarrier protein HPr.
   
 
 0.633
ribA
GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
    
   0.539
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
    
   0.521
JF76_00800
Hypothetical protein.
 
 
 
 0.508
Your Current Organism:
Lactobacillus kullabergensis
NCBI taxonomy Id: 1218493
Other names: CCUG 63631, DSM 26262, L. kullabergensis, Lactobacillus kullabergensis Olofsson et al. 2014, Lactobacillus sp. Biut2, Lactobacillus sp. Biut2N, Lactobacillus sp. ESL0186, Lactobacillus sp. H6HS21N, strain Biut2N
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