STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JF76_18710PTS Man IIB. (164 aa)    
Predicted Functional Partners:
JF76_18690
PTS Man IID.
 
 
 0.973
JF76_18700
PTS Man IIC.
 
 
 0.972
JF76_18680
PTS Man IIA.
 
  
 0.898
JF76_15230
PTS Man IID.
 
 
 0.873
JF76_00450
PTS Man IID.
 
 
 0.871
JF76_04270
PTS Man IID.
 
 
 0.868
JF76_18830
PTS Man IID.
 
 
 0.863
JF76_15240
PTS Man IIC.
 
 
 0.851
JF76_00440
PTS Man IIC.
 
 
 0.833
JF76_04260
PTS Man IIC.
 
 
 0.799
Your Current Organism:
Lactobacillus kullabergensis
NCBI taxonomy Id: 1218493
Other names: CCUG 63631, DSM 26262, L. kullabergensis, Lactobacillus kullabergensis Olofsson et al. 2014, Lactobacillus sp. Biut2, Lactobacillus sp. Biut2N, Lactobacillus sp. ESL0186, Lactobacillus sp. H6HS21N, strain Biut2N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.