STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOY69719.1Hypothetical protein. (143 aa)    
Predicted Functional Partners:
KOY68078.1
Hypothetical protein.
  
     0.774
KOY68475.1
Hypothetical protein.
  
     0.772
KOY68477.1
Uncharacterized protein.
  
     0.772
KOY68292.1
Uncharacterized protein.
  
     0.768
KOY69727.1
Hypothetical protein.
  
     0.764
KOY69721.1
Hypothetical protein.
 
     0.762
KOY69710.1
Hypothetical protein.
  
     0.745
KOY68077.1
Hypothetical protein.
  
     0.743
KOY68442.1
Uncharacterized protein.
  
     0.742
KOY69720.1
Putative RNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
       0.736
Your Current Organism:
Lactobacillus apinorum
NCBI taxonomy Id: 1218495
Other names: CCUG 63287, DSM 26257, L. apinorum, Lactobacillus apinorum Olofsson et al. 2014, Lactobacillus sp. Fhon13N, Lactobacillus sp. Kvahm3N, strain Fhon13N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.