STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOY69033.1Uncharacterized protein. (707 aa)    
Predicted Functional Partners:
KOY69035.1
Hypothetical protein.
 
  
 0.966
KOY69032.1
DNA polymerase III, delta subunit.
 
   
 0.945
KOY69034.1
ComE operon protein 2.
 
    0.909
KOY68887.1
DNA protecting protein DprA.
 
  
 0.893
KOY69154.1
Hypothetical protein.
 
  
 0.888
KOY69258.1
Late competence protein.
 
  
 0.885
KOY69019.1
Uncharacterized protein.
     
 0.880
KOY69156.1
Hypothetical protein.
 
  
 0.864
KOY69153.1
Uncharacterized protein.
 
  
 0.863
KOY68546.1
Hypothetical protein.
  
  
 0.833
Your Current Organism:
Lactobacillus apinorum
NCBI taxonomy Id: 1218495
Other names: CCUG 63287, DSM 26257, L. apinorum, Lactobacillus apinorum Olofsson et al. 2014, Lactobacillus sp. Fhon13N, Lactobacillus sp. Kvahm3N, strain Fhon13N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.