STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOY68401.1Uncharacterized protein. (282 aa)    
Predicted Functional Partners:
KOY68835.1
DAK2 domain fusion protein YloV.
   0.997
KOY68836.1
General stress protein, Gls24 family.
 
    0.654
KOY68891.1
Hypothetical protein.
 
  
 0.500
KOY68402.1
Uncharacterized protein.
       0.489
KOY68892.1
Lysophospholipase L1 related esterase.
  
  
 0.441
KOY68890.1
Uncharacterized protein; Belongs to the UPF0346 family.
       0.433
Your Current Organism:
Lactobacillus apinorum
NCBI taxonomy Id: 1218495
Other names: CCUG 63287, DSM 26257, L. apinorum, Lactobacillus apinorum Olofsson et al. 2014, Lactobacillus sp. Fhon13N, Lactobacillus sp. Kvahm3N, strain Fhon13N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.