STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOY68357.1Putative glycine betaine/L-proline transport ATP-binding protein proV. (399 aa)    
Predicted Functional Partners:
KOY68358.1
Glycine/betaine/carnitine ABC transporter permease.
 0.999
KOY68359.1
Putative glycine/betaine/carnitine ABC transporter, substrate binding lipoprotein.
 
 0.999
KOY69641.1
ABC-type multidrug transport system, ATPase component.
 
     
0.899
KOY68455.1
Oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein.
 
      0.835
KOY68752.1
ABC transporter, ATP-binding protein EcsA.
 
    
0.719
glnP2
Glutamine/histidine ABC transporter, permease protein.
 
    
 0.580
polA
DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
       0.524
KOY68360.1
M13 family peptidase.
       0.521
KOY68355.1
YibE/F family protein.
       0.476
KOY68356.1
Putative multitransmembrane protein.
       0.476
Your Current Organism:
Lactobacillus apinorum
NCBI taxonomy Id: 1218495
Other names: CCUG 63287, DSM 26257, L. apinorum, Lactobacillus apinorum Olofsson et al. 2014, Lactobacillus sp. Fhon13N, Lactobacillus sp. Kvahm3N, strain Fhon13N
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