STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JF75_00560ABC superfamily ATP binding cassette transporter ABC protein. (289 aa)    
Predicted Functional Partners:
JF75_10060
ABC superfamily ATP binding cassette transporter, membrane protein.
 
 0.935
JF75_10050
ABC superfamily ATP binding cassette transporter, membrane protein.
 
 0.933
JF75_13270
Hypothetical protein.
  
 0.920
JF75_13280
Hypothetical protein.
  
 0.920
JF75_08820
ABC-2 type transporter family protein.
  
 
 0.851
JF75_14800
ABC-type multidrug transport system, permease component.
  
 
 0.851
JF75_00540
Uncharacterized protein.
       0.805
JF75_00550
Uncharacterized protein.
       0.805
JF75_07470
Uncharacterized protein.
  
 
 0.798
JF75_17280
ABC transporter.
 
 0.797
Your Current Organism:
Lactobacillus kimbladii
NCBI taxonomy Id: 1218506
Other names: CCUG 63633, DSM 26263, L. kimbladii, Lactobacillus kimbladii Olofsson et al. 2014, Lactobacillus sp. H6HS28N, Lactobacillus sp. Hma2N, strain Hma2N
Server load: low (20%) [HD]