STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JF75_01830Uncharacterized protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (406 aa)    
Predicted Functional Partners:
JF75_01810
Transporter, major facilitator family protein.
 
   
 0.851
JF75_03760
NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.821
JF75_01790
Uncharacterized protein.
 
   
 0.811
JF75_01780
Hypothetical protein.
 
     0.800
JF75_01800
Hypothetical protein.
 
     0.799
JF75_01820
Carbamate kinase; Belongs to the carbamate kinase family.
       0.751
JF75_16310
Putative succinyl-diaminopimelate desuccinylase.
    
  0.697
JF75_12130
Glutamine synthetase.
  
 
 0.674
JF75_01120
Uncharacterized protein.
  
 
 0.665
JF75_10550
Oxoglutarate/malate translocator.
  
 
 0.665
Your Current Organism:
Lactobacillus kimbladii
NCBI taxonomy Id: 1218506
Other names: CCUG 63633, DSM 26263, L. kimbladii, Lactobacillus kimbladii Olofsson et al. 2014, Lactobacillus sp. H6HS28N, Lactobacillus sp. Hma2N, strain Hma2N
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