STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JF75_03750Uncharacterized protein. (338 aa)    
Predicted Functional Partners:
JF75_03710
Beta-lactamase.
 
     0.832
mreD
Rod shape-determining protein MreD.
  
     0.774
JF75_09010
Uncharacterized protein.
  
     0.774
JF75_15840
Beta-propeller domain of methanol dehydrogenase type.
  
     0.773
JF75_07200
Uncharacterized protein.
  
     0.772
JF75_11980
Putative V-type sodium ATP synthase subunit.
  
     0.772
JF75_02030
Transcriptional regulator.
  
     0.767
JF75_09850
Uncharacterized protein.
  
     0.765
JF75_16110
Aldose 1-epimerase.
  
     0.760
JF75_01490
YycH protein.
  
     0.757
Your Current Organism:
Lactobacillus kimbladii
NCBI taxonomy Id: 1218506
Other names: CCUG 63633, DSM 26263, L. kimbladii, Lactobacillus kimbladii Olofsson et al. 2014, Lactobacillus sp. H6HS28N, Lactobacillus sp. Hma2N, strain Hma2N
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.