STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JF75_04380Uncharacterized protein. (672 aa)    
Predicted Functional Partners:
JF75_04290
PTS Man IIC.
 
     0.791
JF75_04300
PTS Man IID.
 
     0.774
JF75_04280
PTS Man IIB.
 
     0.698
JF75_04270
Sugar isomerase protein AgaS.
 
     0.673
lacD
Tagatose 1,6-diphosphate aldolase; Belongs to the aldolase LacD family.
 
     0.564
JF75_04410
RpiR family phosphosugar-binding transcriptional regulator.
  
     0.519
JF75_04310
PTS Man IIA.
 
     0.506
JF75_04390
Alpha-glucosidase, family 31 of glycosyl hydrolase; Belongs to the glycosyl hydrolase 31 family.
       0.493
JF75_00490
PTS Man IIC.
 
     0.485
JF75_00500
PTS Man IID.
 
     0.459
Your Current Organism:
Lactobacillus kimbladii
NCBI taxonomy Id: 1218506
Other names: CCUG 63633, DSM 26263, L. kimbladii, Lactobacillus kimbladii Olofsson et al. 2014, Lactobacillus sp. H6HS28N, Lactobacillus sp. Hma2N, strain Hma2N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.