STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JF75_15200Uncharacterized protein. (134 aa)    
Predicted Functional Partners:
JF75_02030
Transcriptional regulator.
 
     0.772
JF75_16790
Uncharacterized protein.
  
     0.767
JF75_09010
Uncharacterized protein.
  
     0.762
JF75_07200
Uncharacterized protein.
  
     0.750
JF75_02950
CvpA family protein.
  
     0.742
JF75_03710
Beta-lactamase.
  
     0.737
JF75_01490
YycH protein.
  
     0.733
mreD
Rod shape-determining protein MreD.
  
     0.731
JF75_13800
2,3-cyclic nucleotide.
  
     0.714
rpoE
Putative DNA-directed RNA polymerase subunit delta; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family.
  
    0.708
Your Current Organism:
Lactobacillus kimbladii
NCBI taxonomy Id: 1218506
Other names: CCUG 63633, DSM 26263, L. kimbladii, Lactobacillus kimbladii Olofsson et al. 2014, Lactobacillus sp. H6HS28N, Lactobacillus sp. Hma2N, strain Hma2N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.