STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JF75_16450Repressor of fructose operon. (251 aa)    
Predicted Functional Partners:
JF75_16440
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
  
 0.955
JF75_16430
PTS Fru IIABC.
 
  
 0.930
JF75_04200
Galactose-6-phosphate isomerase subunit LacA.
  
 
 0.860
JF75_03300
Putative ribose 5-phosphate isomerase.
  
 
 0.856
JF75_04210
Galactose-6-phosphate isomerase, LacB subunit.
  
 
 0.856
JF75_04430
PTS Fru IIABC.
  
  
 0.717
JF75_05790
PfkB domain protein.
  
 
 0.715
JF75_14980
Hypothetical protein.
  
 
 0.715
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
  
 
 0.709
JF75_03390
Tagatose-6-phosphate kinase family protein; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
  
  
 0.704
Your Current Organism:
Lactobacillus kimbladii
NCBI taxonomy Id: 1218506
Other names: CCUG 63633, DSM 26263, L. kimbladii, Lactobacillus kimbladii Olofsson et al. 2014, Lactobacillus sp. H6HS28N, Lactobacillus sp. Hma2N, strain Hma2N
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