STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JF74_00220Beta-glucosidase Bgl3E. (807 aa)    
Predicted Functional Partners:
JF74_00230
Uncharacterized protein.
      0.925
xylQ
Alpha-xylosidase; Belongs to the glycosyl hydrolase 31 family.
 
 
 0.876
JF74_00200
Sensor histidine kinase.
 
     0.854
JF74_04530
Alpha-glucosidase, family 31 of glycosyl hydrolase; Belongs to the glycosyl hydrolase 31 family.
  
 
 0.848
JF74_16910
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
  
 
 0.848
treC
Trehalose-6-phosphate hydrolase.
  
 
 0.846
JF74_17210
Glucan 1,6-alpha-glucosidase.
  
 
 0.846
JF74_17390
Oligo-1,6-glucosidase.
  
 
 0.846
ampC
Beta-lactamase.
 
 
 0.797
JF74_00240
Glycosyltransferase.
 
   
 0.778
Your Current Organism:
Lactobacillus melliventris
NCBI taxonomy Id: 1218507
Other names: CCUG 63629, DSM 26256, L. melliventris, Lactobacillus melliventris Olofsson et al. 2014, Lactobacillus sp. ESL0184, Lactobacillus sp. Hma8, Lactobacillus sp. Hma8N, strain Hma8N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.