STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JF74_01030Putative integral membrane transport protein. (258 aa)    
Predicted Functional Partners:
JF74_01020
ABC-type uncharacterized transport system, permease component.
 
 
 0.984
JF74_01010
ATP-binding transport protein natA ABC transporter.
 
    0.953
JF74_06940
ATP-binding protein.
 
 
 0.939
JF74_06950
Uncharacterized protein.
 
 
 0.933
JF74_00780
Transcriptional regulator.
 
     0.518
JF74_01000
Uncharacterized protein.
       0.488
JF74_16780
ABC transporter.
  
     0.475
JF74_03590
MFS transporter, putative The macrolide (Erythromycin, oleando-mycin, azithromycin) efflux, MefA.
  
     0.428
Your Current Organism:
Lactobacillus melliventris
NCBI taxonomy Id: 1218507
Other names: CCUG 63629, DSM 26256, L. melliventris, Lactobacillus melliventris Olofsson et al. 2014, Lactobacillus sp. ESL0184, Lactobacillus sp. Hma8, Lactobacillus sp. Hma8N, strain Hma8N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.