STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JF74_01570Putative Cell surface hydrolase (putative). (291 aa)    
Predicted Functional Partners:
JF74_01560
Hypothetical protein.
 
     0.633
ppaC
Putative manganese-dependent inorganic pyrophosphatase.
      0.617
JF74_01580
Uncharacterized protein.
 
     0.606
JF74_11940
Protein of hypothetical function DUF910.
  
     0.592
JF74_18170
D-alanine transfer protein DltD.
 
     0.490
JF74_18390
Amino acid ABC transporter, substrate-binding protein.
  
     0.424
JF74_08740
Uncharacterized protein; Belongs to the UPF0346 family.
 
     0.413
Your Current Organism:
Lactobacillus melliventris
NCBI taxonomy Id: 1218507
Other names: CCUG 63629, DSM 26256, L. melliventris, Lactobacillus melliventris Olofsson et al. 2014, Lactobacillus sp. ESL0184, Lactobacillus sp. Hma8, Lactobacillus sp. Hma8N, strain Hma8N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.