STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JF74_02920Uncharacterized protein. (91 aa)    
Predicted Functional Partners:
ychF
GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
  
  
 0.923
rsmG
Ribosomal RNA small subunit methyltransferase G; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
 
     0.855
parA
Chromosome partitioning protein.
  
    0.847
spoOJ
Chromosome partitioning protein SpoOJ; Belongs to the ParB family.
       0.837
spo0J
Chromosome partitioning protein SpoOJ; Belongs to the ParB family.
       0.837
JF74_02940
Putative membrane-bound protein.
       0.773
JF74_04850
Uncharacterized protein; Belongs to the UPF0297 family.
 
     0.669
JF74_02870
CvpA family protein.
       0.540
JF74_02950
ABC-transporter.
       0.436
JF74_02960
ABC transporter.
       0.429
Your Current Organism:
Lactobacillus melliventris
NCBI taxonomy Id: 1218507
Other names: CCUG 63629, DSM 26256, L. melliventris, Lactobacillus melliventris Olofsson et al. 2014, Lactobacillus sp. ESL0184, Lactobacillus sp. Hma8, Lactobacillus sp. Hma8N, strain Hma8N
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.