STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JF74_02950ABC-transporter. (574 aa)    
Predicted Functional Partners:
JF74_02960
ABC transporter.
 
0.993
JF74_16820
ABC multidrug transport system.
 
0.976
mdlB
Multidrug ABC superfamily ATP binding cassette transporter, ABC protein.
 
0.970
JF74_11170
Multidrug ABC superfamily ATP binding cassette transporter, ABC protein.
 
0.969
JF74_05570
ABC transporter-like protein.
 
0.968
ecfA
ABC superfamily ATP binding cassette transporter, ABC protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
 
0.937
JF74_01550
ABC superfamily ATP binding cassette transporter ATP-binding and membrane spanning permease.
0.912
pstB2
Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
     
0.900
JF74_15830
Amino acid ABC transporter ATP-binding protein, PAAT family.
     
0.900
JF74_17140
Multidrug ABC transporter.
 
0.880
Your Current Organism:
Lactobacillus melliventris
NCBI taxonomy Id: 1218507
Other names: CCUG 63629, DSM 26256, L. melliventris, Lactobacillus melliventris Olofsson et al. 2014, Lactobacillus sp. ESL0184, Lactobacillus sp. Hma8, Lactobacillus sp. Hma8N, strain Hma8N
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