Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
JF74_03810 | JF74_07440 | JF74_03810 | JF74_07440 | Putative esterase. | Glycoside hydrolase; Belongs to the glycosyl hydrolase 2 family. | 0.674 |
JF74_03810 | JF74_09010 | JF74_03810 | JF74_09010 | Putative esterase. | Putative phosphoesterase. | 0.671 |
JF74_03810 | JF74_14410 | JF74_03810 | JF74_14410 | Putative esterase. | Uncharacterized protein. | 0.636 |
JF74_03810 | JF74_15030 | JF74_03810 | JF74_15030 | Putative esterase. | Uncharacterized protein. | 0.731 |
JF74_03810 | JF74_17030 | JF74_03810 | JF74_17030 | Putative esterase. | 6-phospho-alpha-glucosidase (Maltose-6'-phosphate hydrolase). | 0.686 |
JF74_03810 | acpP | JF74_03810 | JF74_11410 | Putative esterase. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.763 |
JF74_03810 | celF | JF74_03810 | JF74_02300 | Putative esterase. | Putative maltose-6-phosphate glucosidase. | 0.686 |
JF74_03810 | dltC | JF74_03810 | JF74_18180 | Putative esterase. | D-alanine--poly(phosphoribitol) ligase subunit 2; Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC- carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall. | 0.763 |
JF74_03810 | dnaJ | JF74_03810 | JF74_10740 | Putative esterase. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.639 |
JF74_03810 | glcD | JF74_03810 | JF74_11150 | Putative esterase. | Glycolate oxidase. | 0.704 |
JF74_07440 | JF74_03810 | JF74_07440 | JF74_03810 | Glycoside hydrolase; Belongs to the glycosyl hydrolase 2 family. | Putative esterase. | 0.674 |
JF74_07440 | JF74_17030 | JF74_07440 | JF74_17030 | Glycoside hydrolase; Belongs to the glycosyl hydrolase 2 family. | 6-phospho-alpha-glucosidase (Maltose-6'-phosphate hydrolase). | 0.751 |
JF74_07440 | celF | JF74_07440 | JF74_02300 | Glycoside hydrolase; Belongs to the glycosyl hydrolase 2 family. | Putative maltose-6-phosphate glucosidase. | 0.751 |
JF74_07440 | dnaJ | JF74_07440 | JF74_10740 | Glycoside hydrolase; Belongs to the glycosyl hydrolase 2 family. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.428 |
JF74_07440 | glcD | JF74_07440 | JF74_11150 | Glycoside hydrolase; Belongs to the glycosyl hydrolase 2 family. | Glycolate oxidase. | 0.793 |
JF74_09010 | JF74_03810 | JF74_09010 | JF74_03810 | Putative phosphoesterase. | Putative esterase. | 0.671 |
JF74_09010 | dnaJ | JF74_09010 | JF74_10740 | Putative phosphoesterase. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.605 |
JF74_14410 | JF74_03810 | JF74_14410 | JF74_03810 | Uncharacterized protein. | Putative esterase. | 0.636 |
JF74_15030 | JF74_03810 | JF74_15030 | JF74_03810 | Uncharacterized protein. | Putative esterase. | 0.731 |
JF74_15030 | glcD | JF74_15030 | JF74_11150 | Uncharacterized protein. | Glycolate oxidase. | 0.570 |
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